PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14650
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 65aa    MW: 7408.37 Da    PI: 10.6811
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14650genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.6e-20151255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+++AeIrdp+    r   r++lg+f+ta eAa+a+++a+ +++g
  PEQU_14650  1 QYRGVRQRR-WGKFAAEIRDPT----RakSRVWLGTFDTAVEAAQAYDRAAFEMRG 51
                59****998.**********84....234*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.6E-38165IPR001471AP2/ERF domain
PROSITE profilePS5103223.512159IPR001471AP2/ERF domain
CDDcd000182.81E-26160No hitNo description
Gene3DG3DSA:3.30.730.104.6E-33160IPR001471AP2/ERF domain
PfamPF008472.9E-14251IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-23261IPR016177DNA-binding domain
PRINTSPR003677.5E-11213IPR001471AP2/ERF domain
PRINTSPR003677.5E-112541IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    Send to blast
QYRGVRQRRW GKFAAEIRDP TRAKSRVWLG TFDTAVEAAQ AYDRAAFEMR GSKAILNFPN  60
EVGCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-28162566ATERF1
3gcc_A8e-28162566ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009389258.14e-33PREDICTED: ethylene-responsive transcription factor ERF105-like
SwissprotQ404781e-31ERF5_TOBAC; Ethylene-responsive transcription factor 5
TrEMBLM0S6U02e-32M0S6U0_MUSAM; Uncharacterized protein
TrEMBLV7BHY83e-32V7BHY8_PHAVU; Uncharacterized protein
STRINGGSMUA_Achr2P10490_0015e-32(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-32ethylene responsive element binding factor 5